Metabolic consequences of cobalamin scarcity in diatoms as revealed through metabolomics (Thalassiosira pseudonana study)

Study details

Source ID

https://identifiers.org/metabolights:MTBLS703

Title

Metabolic consequences of cobalamin scarcity in diatoms as revealed through metabolomics (Thalassiosira pseudonana study)

Summary

Metabolic effects of cobalamin scarcity in diatoms.

Observation

Metabolite pool changes in diatoms under cobalamin limitation.

Findings

Cobalamin limitation affects methionine cycle, transsulfuration pathway, and osmolyte pools in diatoms.

Disease terms

Cobalamin

Gene terms

—

Chemical terms

acylcarnitines, adenosylcobalamin, polyamine, 5'-methylthioadenosine, methionine, cobalamin, carbon, vitamin B12

Organisms

Thalassiosira pseudonana, T. pseudonana

Raw data (JSON) Show

Also available at /api/study/https://identifiers.org/metabolights:MTBLS703.

{
  "@type": "Dataset",
  "go_id": [
    "https://identifiers.org/GO:0006596",
    "https://identifiers.org/GO:0015979"
  ],
  "go_kw": [
    "polyamine biosynthesis",
    "photosynthesis"
  ],
  "integmet_study": "MTBLS703",
  "mesh_chemical_id": [
    "https://identifiers.org/mesh:C116917",
    "https://identifiers.org/mesh:C000913",
    "https://identifiers.org/mesh:D011073",
    "https://identifiers.org/mesh:C008500",
    "https://identifiers.org/mesh:D008715",
    "https://identifiers.org/mesh:D014805",
    "https://identifiers.org/mesh:D002244"
  ],
  "mesh_chemical_pubtator_kw": [
    "acylcarnitines",
    "adenosylcobalamin",
    "polyamine",
    "5\u0027-methylthioadenosine",
    "methionine",
    "cobalamin",
    "carbon",
    "vitamin B12"
  ],
  "mesh_disease_id": [
    "https://identifiers.org/mesh:C564747"
  ],
  "mesh_disease_pubtator_kw": [
    "Cobalamin"
  ],
  "ncbi_taxonomy_id": [
    "https://identifiers.org/taxonomy:35128"
  ],
  "ncbi_taxonomy_pubtator_kw": [
    "Thalassiosira pseudonana",
    "T. pseudonana"
  ],
  "source_id": "https://identifiers.org/metabolights:MTBLS703",
  "study_findings": "Cobalamin limitation affects methionine cycle, transsulfuration pathway, and osmolyte pools in diatoms.",
  "study_observation": "Metabolite pool changes in diatoms under cobalamin limitation.",
  "study_summary": "Metabolic effects of cobalamin scarcity in diatoms.",
  "study_title_original": "Metabolic consequences of cobalamin scarcity in diatoms as revealed through metabolomics  (Thalassiosira pseudonana study)"
}